Insertion junction: CLIP2.039729_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039729
Chromosome:chromosome 3
Location:7486616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205650 (1 of 2) IPR000626//IPR009060//IPR015940//IPR029071 - Ubiquitin domain // UBA-like // Ubiquitin-associated domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATGACTCGATGGCGCCAGGGGCCGACTGAGTCCTGGTCGCTCACCCCA
Internal bar code:TCAACCGGTTCAGCACGGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:834
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTACACACACACACACAC
Suggested primer 2:GCACGATAAGGGGAGGATGG