Insertion junction: CLIP2.039747_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039747
Chromosome:chromosome 11
Location:3380920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477000 SNRK2D snRK1 family in Chlamydomonas, subgroup 2; (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGACTCAGGGGGAGGGAGTGGGCGTTGCGAGGTTAGGGCAATGGGAA
Internal bar code:GGCAGAAGAACACACTGGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:293
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCAGCGCATCTTGGACG
Suggested primer 2:ACTGCCTACCGTCTACCACT