Insertion junction: CLIP2.039756_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039756
Chromosome:chromosome 14
Location:449245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610750 MAE16 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACCCGAGCCTACACGCCACCGCGCTCACCAGGCGGCCCACAGCTCAC
Internal bar code:TTGTATTCGCTGAAACATAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:310
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGTAGAAGCAGCAGTGG
Suggested primer 2:CCATCCCCTCACTCCTCAGA