Insertion junction: CLIP2.039766_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039766
Chromosome:chromosome 7
Location:5011515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347450 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGGCGCGATGCAGGCCTTGATCAAAGACGCGGGTGTAGTGGACGCGCT
Internal bar code:GAGGAAGCGCTTATCAAGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1737
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTACAGGCCGGCTATACCAC
Suggested primer 2:CGCGTTTGTGTGCTTGTGTA