Insertion junction: CLIP2.039767_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039767
Chromosome:chromosome 16
Location:7236216
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677205 (1 of 4) PF00207 - Alpha-2-macroglobulin family (A2M) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATTGCACAGAACTGCGTCGTGATAAGGAAGACCGAAATGGGTCAGGG
Internal bar code:AGGAATGATTTCAGGTAGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2117
LEAP-Seq percent confirming:37.037
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCATGCAATACTGAGCAC
Suggested primer 2:CCCTTCACCTCCCATTGTCC