Insertion junction: CLIP2.039769_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039769
Chromosome:chromosome 10
Location:5032336
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454734 TIC21,PIC1 (1 of 1) PTHR21649//PTHR21649:SF13//PTHR34548 - CHLOROPHYLL A/B BINDING PROTEIN // LHCA2 PROTEIN // FAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGCCATGGCGGCGTTGCCTGGCGGCGGCGGTTTTAACCTCAACATGG
Internal bar code:AGCACGACTGCCCGTAGTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGAGAGAGGACACGCT
Suggested primer 2:TGTGTCTCTGCGTCTGTGTC