Insertion junction: CLIP2.039774_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039774
Chromosome:chromosome 6
Location:3745196
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278163 ARG9 (1 of 1) 2.6.1.11 - Acetylornithine transaminase / Succinylornithine aminotransferase; Acetylornithine aminotransferase 3'UTR
Cre06.g278164 (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGTAAGTAATCGAAGTAAGTACTGCGTCCTACACCCGCATAGAAAGG
Internal bar code:TATTGCAATCATCGTGGAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1095
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCGGTGTTGAGTTGGAT
Suggested primer 2:TCGCAACGTTCTGGACATCA