Insertion junction: CLIP2.039779_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039779
Chromosome:chromosome 17
Location:6644317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745747 (1 of 3) PTHR12136//PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTACGTGCTTGAGTCGTTGCGCATTCCTGGCGTTGCGCACCTCACCCAT
Internal bar code:TAGACCCGGGCGGATGAACACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3422
LEAP-Seq percent confirming:86.0656
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:122

Suggested primers for confirmation by PCR

Suggested primer 1:GGGATGACCTGTTGGGAGTG
Suggested primer 2:CGCCAACACTGACCTGTACT