Insertion junction: CLIP2.039781_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039781
Chromosome:chromosome 10
Location:1475685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428500 PHX14,P4H2,PFH2 (1 of 14) K00472 - prolyl 4-hydroxylase (E1.14.11.2); Prolyl 4-hydroxylase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCCCTCCACGGTGCTCGTCCCCCACCCCAAAAAGACGCTGCAGGACG
Internal bar code:CAATTTTGAAGGAGCCCTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1332
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACCCGCTTCCCATTCTT
Suggested primer 2:TGGTTCTTCTCACACTCGCC