Insertion junction: CLIP2.039782_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039782
Chromosome:chromosome 12
Location:2393613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507750 (1 of 1) PF00069//PF07714//PF13637 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCCACACCATCCCCTTATTTCGGCGGCATAGTTGTGCCGCGGCATGC
Internal bar code:GTTGGCGCGTGCGTTTAGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2972
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGCGACTTGGACAGACC
Suggested primer 2:ATGAAGTGAAGTGCCGACGT