Insertion junction: CLIP2.039799_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039799
Chromosome:chromosome 8
Location:2997532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g374950 (1 of 6) PF02582 - Uncharacterised ACR, YagE family COG1723 (DUF155) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAACAGATTGCAAGTAGTGGAGGGGGATTGTGTGCGTGTGTGTGTGTG
Internal bar code:TATGGAGAGGTAGGCCGCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1586
LEAP-Seq percent confirming:85.2941
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTATATGCGAGCTGTGGT
Suggested primer 2:GCGGCATTACATGAAGGCAG