Insertion junction: CLIP2.039806_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039806
Chromosome:chromosome 13
Location:4077170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590905 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAAAGAATGTCACGGAGCAGGATGGCACTGAGGCTTACATGCACGGGT
Internal bar code:TCCCTCATAGAATTGGGCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4320
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCACTTCATTTGCACACA
Suggested primer 2:GATGCTGGAAACCATTCGCC