Insertion junction: CLIP2.039807_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039807
Chromosome:chromosome 12
Location:3408486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497800 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATAGGGGTCGGTGTAGCCGCAATGGCCGCAGCGGAAGCGGCTGCAGC
Internal bar code:CCACCGCGGTAGCCGGAGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:815
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGTTCAAGGAGCGAGA
Suggested primer 2:CAGCACATCAGTACGCAACG