Insertion junction: CLIP2.039811_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039811
Chromosome:chromosome 12
Location:719520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g492750 (1 of 5) 3.2.1.1 - Alpha-amylase / Glycogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAAGTAACGCCGCTGATCCGCCTCCTCCACACCAGACCAGTCCTGCA
Internal bar code:AATTGCCAACAAATTTCACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3736
LEAP-Seq percent confirming:90.566
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCTAACTGCTGCTGCTG
Suggested primer 2:TGTGCCCCCATCTTAACCAC