Insertion junction: CLIP2.039815_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039815
Chromosome:chromosome 3
Location:8642460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g209953 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAACGCTCCCATGGTTTACAACAGGGCCATATCCCTGGGCGCGTTCG
Internal bar code:TGAATACCAATTCAATGCAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2449
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGCAGCATTGACATCCG
Suggested primer 2:CTTAGCGTCGGAACAGGGTT