Insertion junction: CLIP2.039824_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039824
Chromosome:chromosome 2
Location:888431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078950 MMP17 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGGTATCCGTAAGTGACTGCGGCGCCGTCTGGGCGGGCTTCCTTGTGT
Internal bar code:GTGTTCAGACCTGTATACAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:963
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCCTTGCTTCCGCTTTT
Suggested primer 2:CAGCACACTCCTACAGCCAA