Insertion junction: CLIP2.039828_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039828
Chromosome:chromosome 2
Location:5966204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118125 5'UTR
Cre02.g118151 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAATACTTACGGCCTGAGACCGCCCTGCCCCAACCGCTTGTCCCTTCC
Internal bar code:TTTAATGTTTCAGTAATGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:6594
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGCTATGGGACGTACTC
Suggested primer 2:CTGGTCTGGCGACATTTCCT