Insertion junction: CLIP2.039833_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039833
Chromosome:chromosome 9
Location:1115816
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401650 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCGCTCCAAGGGCTCAGGCCTGCCTGATGTGCTTGCAGCTAGGCGCG
Internal bar code:TGCTTAGTCCTGGACATACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:77
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACAGCAGACGCATA
Suggested primer 2:GCTGAACCTGTTCTGGTCGA