Insertion junction: CLIP2.039835_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039835
Chromosome:chromosome 13
Location:1460740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572250 (1 of 6) IPR002100 - Transcription factor, MADS-box CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGTAGGGTAGGCATGCTGTTGTGCGCCGGCTGGCTTTGGTCGAGGTC
Internal bar code:TTTCGCTGTCGGAGGATCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3184
LEAP-Seq percent confirming:65.9091
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACTATGGCTGGCGAGGG
Suggested primer 2:GCCGAGAGCGAGATCAAGAA