Insertion junction: CLIP2.039846_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039846
Chromosome:chromosome 11
Location:3391423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477050 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTACTAACTTCTGAGCTCAAGCCCTGTAGCCCATCTAAGTACGCTAG
Internal bar code:TTGGTGGCGTCAGACTCCTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1240
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGGCCACCTCAATGATT
Suggested primer 2:TGTTCCACTCCGAGTTCAGC