Insertion junction: CLIP2.039849_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039849
Chromosome:chromosome 14
Location:2911090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801642 (1 of 4) PTHR14255//PTHR14255:SF3 - ATP-DEPENDENT PROTEASE CEREBLON // SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACTCAGAGGGCTGTATCTATGGGTGTTGACGGCGGGAGAGTGAGGTTG
Internal bar code:GTCAAGAGCATAGACGATTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:82
LEAP-Seq percent confirming:4.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGGTTGGTCGGGTGATG
Suggested primer 2:CGAGAAGGGTTCCCTGCTTT