Insertion junction: CLIP2.039851_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039851
Chromosome:chromosome 9
Location:2666523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392000 (1 of 3) PF09763 - Exocyst complex component Sec3 (Sec3_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAATGTGACCATGTACGTGACCTCCTCCTCCCCCTCAATGTAACCCCC
Internal bar code:CTGTCATGGACTGATTCGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:239
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGAAGGGGTCGTACGTG
Suggested primer 2:CCTCCCTCCCGTAATCATGC