Insertion junction: CLIP2.039852_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039852
Chromosome:chromosome 6
Location:1764526
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263100 (1 of 2) PF10263 - SprT-like family (SprT-like) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACCAGTGGTGGGTGCGGTAGTTATTGACCTCGCCGTGCATGCTGTGA
Internal bar code:AAAGGCGGCGGTGCGTCTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2866
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGCTACTCAAGGTAGGA
Suggested primer 2:ATGCCTTTTTCTTGCCTGCG