Insertion junction: CLIP2.039852_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039852
Chromosome:chromosome 6
Location:1764527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263100 (1 of 2) PF10263 - SprT-like family (SprT-like) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGTGCACCCGTAAGGGCTCTTCCGGGCGTGGGACTGCACCATCTTGG
Internal bar code:AAAGGCGGCGGTGCGTCTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:461
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCTTTTTCTTGCCTGCG
Suggested primer 2:AGCCGCTACTCAAGGTAGGA