Insertion junction: CLIP2.039860_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039860
Chromosome:chromosome 16
Location:833377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801884 (1 of 1) K19001 - ATP-dependent DNA helicase (HELLS, DDM1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCATGCCAGCTCAAATTGAACCAAGCGGGGAGGAAGGGGAGGGGGT
Internal bar code:ATGAGAGGCAGGAGCCTTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:367
LEAP-Seq percent confirming:27.7778
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGATCAGCGAGGACGAAG
Suggested primer 2:CAAAAACAACAACACGCCGC