Insertion junction: CLIP2.039870_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039870
Chromosome:chromosome 5
Location:3319194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232500 FXL8 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTTCCTTTCCTGACTCCTCGTCCTCCCCGTCCTCGTCATCGTCGCGA
Internal bar code:CAGGAGGCAGCGAGGTGGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:704
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAATGTGTACAAAGCGCT
Suggested primer 2:GTCGTTCTTGTCGTTGGCTG