Insertion junction: CLIP2.039870_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039870
Chromosome:chromosome 5
Location:3319197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232500 FXL8 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGCAGAGGAGGGTTTGGCCCTGCACAAGGTGAGAGGCGCGGCTCCG
Internal bar code:CAGGAGGCAGCGAGGTGGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTTCTTGTCGTTGGCTG
Suggested primer 2:GCCAATGTGTACAAAGCGCT