Insertion junction: CLIP2.039875_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039875
Chromosome:chromosome 13
Location:5109228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606900 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGGTGAAGCATGGCACGGTGTTAACACGGGGAAACCGGGAAGGGTTC
Internal bar code:AAAAATCGGCCGGCGCTTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1661
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGTTCTCCCTTCCGAAA
Suggested primer 2:TCCCAACTGCTGATGTGGAC