Insertion junction: CLIP2.039877_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039877
Chromosome:chromosome 11
Location:1503621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g469000 FAP107 Flagellar Associated Protein 107 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTCGTGCTGACAACCCCTGACGGGAGACCGAGCCTTTGGATTCACCC
Internal bar code:GTTCGGGATGGGGATACAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1133
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCATAGGTTGGCGAATG
Suggested primer 2:CGAGCGACCAACTATCCTCC