Insertion junction: CLIP2.039879_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039879
Chromosome:chromosome 9
Location:5209353
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406900 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGAGCAGGGTGAAGCGGATGGGGTGCTGTGCATGGTCCCCGGCCTC
Internal bar code:TTTCATGTACATCGAGCCACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1646
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGACAAGAGTTGAGTGCG
Suggested primer 2:AACACCCAAGGCAACCTCAA