Insertion junction: CLIP2.039898_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039898
Chromosome:chromosome 1
Location:5666392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040500 (1 of 1) K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAACCACCCTCCCCCCAGTTGGCTGCCGACCTTCCACAACCGTGCAA
Internal bar code:GTCCTCGGTCGTGTTAAGTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3311
LEAP-Seq percent confirming:98.7421
LEAP-Seq n confirming:157
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:159

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTCCATTAATGCTGGTG
Suggested primer 2:TCTCGCTGTCGGATTATGGC