Insertion junction: CLIP2.039904_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039904
Chromosome:chromosome 13
Location:1223756
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570250 CKIN1L,SNRK1B,CKIN2 (1 of 1) PF07714//PF14531 - Protein tyrosine kinase (Pkinase_Tyr) // Kinase-like (Kinase-like); snRK1 family in Chlamydomonas, subgroup 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGGCCGCTGCCGGCGCAGCTTCTGGCGCCTCCGCAACGGGCACCACC
Internal bar code:ACACCGTGGATAGCCGCCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2846
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCTCTCTCACCTTGACC
Suggested primer 2:AGCAGCAATCGCAACAACAG