Insertion junction: CLIP2.039911_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039911
Chromosome:chromosome 17
Location:4547198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802095 (1 of 14) PF02493 - MORN repeat (MORN) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTGCAACCCCCTGCTACACGTGACCCACCGCGACCGACGCAGAGCTG
Internal bar code:CGGCAGACGGTGAAGCTTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3047
LEAP-Seq percent confirming:69.4444
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGTATGCCGGTAGTCCT
Suggested primer 2:AGGCTCCGATAGAATGCTGC