Insertion junction: CLIP2.039916_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039916
Chromosome:chromosome 3
Location:3002829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163300 CDT1 (1 of 1) PTHR28637:SF1 - DNA REPLICATION FACTOR CDT1; DNA replication initiation factor, CDT1-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCCCAAATAGGTTACTGTAATTGTTTGTCTCATAAGTACACATGAT
Internal bar code:CTAAGTATGCTAAAGTAAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2316
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTTATGGCAGCTGGTCTGGG
Suggested primer 2:TCACGCTGTTGTAGGTGACC