Insertion junction: CLIP2.039917_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039917
Chromosome:chromosome 3
Location:3188758
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165100 PSAI1 (1 of 1) K02696 - photosystem I subunit VIII (psaI); Photosystem I reaction center subunit PsaI intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATACGCATGCAACCCTGACTCACCGGTCAGGGGCACGAAGACCGAGGG
Internal bar code:GGGAGTGAGTAGGGGAATCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4553
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGATTGTTGCTCGGAGCG
Suggested primer 2:CACCCTCATCAACACCTCCC