Insertion junction: CLIP2.039923_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039923
Chromosome:chromosome 7
Location:422439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315050 GGH1 (1 of 2) 3.4.19.9 - Gamma-glutamyl hydrolase / Pteroyl-poly-alpha-glutamate hydrolase; Gamma-glutamyl hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGAGGACGGGATGTGGGGGTTTGGGGCGTGGACCGGAGCAGGGCAT
Internal bar code:AAGGGACGTTTTCAGAGCGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:317
LEAP-Seq percent confirming:3.44828
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGCTCTCAGGCTTGTG
Suggested primer 2:TGTAAGGAAACAGTCGCGCT