Insertion junction: CLIP2.039930_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039930
Chromosome:chromosome 12
Location:9038497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544750 (1 of 1) PF13637//PF13857 - Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCAACTTGCCAACACATACAGGTGGAACACGCACAGGCGGGCTGTGTG
Internal bar code:GGTGAGCCAGTGGCAACGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:730
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGATTTGCTCCTGCCCTGTC
Suggested primer 2:GCTTGCGAAGTCGGTTTTGT