Insertion junction: CLIP2.039933_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039933
Chromosome:chromosome 12
Location:4052390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516400 SPL24 Pre-mRNA splicing factor; (1 of 1) PF04146 - YT521-B-like domain (YTH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCCCGTTCGTGCCGCTGCCTCGTCCCCCTTGCCAGCTCCGGCCTCGC
Internal bar code:TTATCCCCCTTACGACTAGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4029
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ACGATTATCCAGACGGCGAC
Suggested primer 2:CATGATGGTCGTCAGCAGGT