Insertion junction: CLIP2.039933_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039933
Chromosome:chromosome 12
Location:4052399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516400 SPL24 Pre-mRNA splicing factor; (1 of 1) PF04146 - YT521-B-like domain (YTH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCTGGGCGGTTGCCGAACAGTGGCGGGCCACAAGGCTTCAACGCACG
Internal bar code:CTACAAGAGACAATGAGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:123
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CATGATGGTCGTCAGCAGGT
Suggested primer 2:ACGATTATCCAGACGGCGAC