Insertion junction: CLIP2.039938_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039938
Chromosome:chromosome 12
Location:2930196
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502450 ELG8 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 8 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACTTGCACCATAGGACGATGCTGGTTGTGTGCCAGGCGGCACAGCAC
Internal bar code:TAAGCAGGTTCATAGTAATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1259
LEAP-Seq percent confirming:38.7097
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGAAAACCACCAACCGC
Suggested primer 2:ACAAATGGAGACGAAGCGGT