Insertion junction: CLIP2.039940_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039940
Chromosome:chromosome 10
Location:2166676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433450 (1 of 1) PTHR22844//PTHR22844:SF125 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAACAAGCTACACAAGATCGCTTGACGCACATCAAGCGCTCCCTGCTC
Internal bar code:AGTGCAATGATAAATGGGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:168
LEAP-Seq percent confirming:47.2727
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGATTGTCCACCGTGTG
Suggested primer 2:GAGGAAGACGTGTCCCACAG