Insertion junction: CLIP2.039944_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039944
Chromosome:chromosome 17
Location:4370419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730483 (1 of 1) IPR000104//IPR016181 - Antifreeze protein, type I // Acyl-CoA N-acyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCACCAGCCTCGCCTGCCCGCTCCGGAGCCGCTGTAGCAGACCACTGT
Internal bar code:TTTTGTCACTAGTGCTCATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1069
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTGTGCCGGTATGTCTG
Suggested primer 2:AGGAGCACATGTTGAGCCTC