Insertion junction: CLIP2.039945_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039945
Chromosome:chromosome 7
Location:2620726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330300 (1 of 2) K14411 - RNA-binding protein Musashi (MSI) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACATGACAGACAAACAAAGCGCTAAAGTCTTTGTAGGCGGGCTGAGC
Internal bar code:ATTGGTGTAGAGAACCAATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1545
LEAP-Seq percent confirming:37.037
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTTTGGCTTCAACCTGC
Suggested primer 2:CACGCTTGAACGCAGTATCG