Insertion junction: CLIP2.039947_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039947
Chromosome:chromosome 10
Location:1099774
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425300 (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGGCTTTCAACCGAAGGCAGCACTCGTTCTTGATGTGTAGTGTGGTG
Internal bar code:GAGGTATGTGTTCTTAGACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:832
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCGCTTCACTTCCAGCAA
Suggested primer 2:GGAGGTCCACAGTCCACATG