Insertion junction: CLIP2.039947_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039947
Chromosome:chromosome 10
Location:1099777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425300 (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAAGGTATCTCCTGTATGGGACCAAGCCCACTCTCTTGTGCCCCCGTG
Internal bar code:GAGGTATGTGTTCTTAGACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3229
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:130
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTCCACAGTCCACATG
Suggested primer 2:ACTCGCTTCACTTCCAGCAA