Insertion junction: CLIP2.039950_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039950
Chromosome:chromosome 10
Location:4925031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453807 CTPB1 (1 of 2) PTHR32060:SF5 - PEPTIDASE S41 FAMILY PROTEIN; C-terminal peptidase B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTATGAGAGATGCAGGTCGGACGGGAATGTGGGCGATGTGGGTTTGG
Internal bar code:TGCTACATATTCGCCCACGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:104
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGCGACTCCACAAGCAA
Suggested primer 2:TGTGCTGCAGTAGGACTTGG