Insertion junction: CLIP2.039951_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039951
Chromosome:chromosome 14
Location:1680065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618860 SRH24 (1 of 1) K11320 - E1A-binding protein p400 [EC:3.6.4.-] (EP400); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGATTCGGACCACTCGGTTGCGGGGTAAAAAGAGTAACGTTAAAGTTG
Internal bar code:CCGGCCTCCTGAGGCATGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:552
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGCAGACTTTTACGGC
Suggested primer 2:ACTCATTAGCCACGCACACA