Insertion junction: CLIP2.039954_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039954
Chromosome:chromosome 12
Location:1752053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486050 (1 of 1) PF00098//PF00397 - Zinc knuckle (zf-CCHC) // WW domain (WW) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGGGCACCCAGTTCAAATCGTGGGGCGCGGCTGCCGAAGTCTTTCACA
Internal bar code:TAAGCGAGTTGTCGCTCTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1052
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTCGCCGTCTAAGTATG
Suggested primer 2:GTTCAGGCGAACCCAAGAGA