Insertion junction: CLIP2.039957_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039957
Chromosome:chromosome 9
Location:5763262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410900 NAR2,NIT8 nitrite transporter accessory protein; (1 of 1) PF16974 - High-affinity nitrate transporter accessory (NAR2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTGTACGATGGTCTCGACTGACAGGTAGTTGGTGGCACCGTTGCGGC
Internal bar code:GTTATCTTTCACGCTACCAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2839
LEAP-Seq percent confirming:98.7013
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCAACCTTTCGTCAGC
Suggested primer 2:TAGTCACAGACCACACGCAC