Insertion junction: CLIP2.039965_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039965
Chromosome:chromosome 6
Location:1989986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264900 HTB13 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGTTCACCTCGGGCTAAGCGCGCTCAGAGGCTGGACCTTGTCTTCAA
Internal bar code:GGCGCCGGGTTCGCTTCTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:5362
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGCACGTAGGAGCCCAG
Suggested primer 2:CAGCCATTGTGTTGGGTTGG